Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs151004271 chr7:64528646 C/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs1510306 chr7:97403141 G/A TECPR1 chr7:97843936-97881563:- 0.71 5.44 1.47E-6 Box Plot
ACC rs151061652 chr1:63971362 C/A ITGB3BP chr1:63906441-64059392:- 0.61 6.4 4.48E-8 Box Plot
ACC rs151156128 chr7:64428923 A/C INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs1527139 chr20:45153203 A/G LOC100240726 chr20:45092301-45093931:- 0.7 5.94 2.37E-7 Box Plot
ACC rs1544777 chr5:96314230 A/G ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs1559267 chr5:96303698 A/T ERAP2 chr5:96211643-96255420:+ 0.87 9.37 9.25E-13 Box Plot
ACC rs1567304 chr5:56274255 A/C C5orf35 chr5:56205103-56213010:+ 1.06 5.61 7.91E-7 Box Plot
ACC rs1569413 chr22:45756081 A/G FAM118A chr22:45704849-45737836:+ 0.87 6.49 3.21E-8 Box Plot
ACC rs1587175 chr1:213065262 A/T LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs1596566 chr8:71698576 A/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs1597245 chr2:114448217 C/G DDX11L2 chr2:114356613-114358838:- 0.71 5.45 1.39E-6 Box Plot
ACC rs1597245 chr2:114448217 C/G RPL23AP7 chr2:114368079-114384667:- 0.64 5.37 1.89E-6 Box Plot
ACC rs1615070 chr2:61393175 A/G C2orf74 chr2:61372203-61391964:+ 0.58 6.57 2.38E-8 Box Plot
ACC rs1616938 chr2:61378300 C/A C2orf74 chr2:61372203-61391964:+ 0.64 6.2 9.41E-8 Box Plot